Probiotics and Thyroid Health: How Gut Health Supports Hormone Balance

The link between gut health and thyroid function is gaining momentum in the world of integrative medicine, and probiotics are emerging as a promising tool to support thyroid conditions—especially autoimmune disorders like Graves' disease and Hashimoto's thyroiditis (Knezevic et al., 2020).

Even subtle imbalances in the gut microbiome can impact inflammation, immune regulation, and hormone production—all key factors in maintaining a healthy thyroid.

Can Probiotics Help Thyroid Function?

A recent 6-month clinical study explored the effects of probiotics on thyroid markers in patients with Graves' disease (Huo et al., 2021). Participants were divided into three treatment groups:

1. Standard drug therapy alone
2. Drug therapy + black bean powder (control)
3. Drug therapy + Bifidobacterium longum (a beneficial probiotic strain)

While the standard medication improved general thyroid function, it didn't significantly reduce thyrotropin receptor antibodies (TRAb)—a key marker for autoimmune activity and relapse risk in Graves' disease. However, the group that received the B. longum probiotic saw substantial improvements, including normalization of TRAb levels, suggesting that probiotics may help regulate immune responses in autoimmune thyroid conditions (Huo et al., 2021).

Best Probiotics for Thyroid Support

Two high-quality probiotic supplements featured in the study include:

• Probiotic 250-B by Designs for Health
• Probiotic Pro BB536 by Bioclinic Naturals

Both products are shelf-stable, dairy-free, and contain therapeutic levels of Bifidobacterium longum—a strain shown to support both immune modulation and gut balance.

Synbiotics and Hypothyroidism: Improving Quality of Life

Another clinical trial evaluated the use of synbiotics (a combination of probiotics and prebiotics like fructooligosaccharides) in hypothyroid patients (Vahid et al., 2023). Over 10 weeks, hormone levels remained stable, but those taking synbiotics reported improved mood, reduced pain, and better overall well-being.

Although the specific synbiotic formula used in the study is not available in the U.S., top professional-grade alternatives include:

• Symbiotic Intensive by Pharmax
• Ther-Biotic Synbiotic by Klaire Labs

These options are widely trusted in the integrative and integrative medicine communities.

Important Considerations: SIBO and Probiotic Tolerance

While probiotics are generally safe, they aren't suitable for everyone, especially patients with Small Intestinal Bacterial Overgrowth (SIBO). In these cases, introducing probiotics too soon can cause:

• Bloating
• Gas
• Changes in bowel habits

That's why a comprehensive GI workup is essential before starting probiotic therapy. If the gut is clear of overgrowths like Candida, parasites, or pathogenic bacteria, probiotics can be safely added—often in combination with herbal or pharmaceutical antimicrobials such as:

• Oregano oil
• Garlic extract
• Grapefruit seed extract

Do Probiotics Permanently Colonize the Gut?

Most probiotic strains do not permanently colonize the gut, but they can positively influence the microbiome during treatment. When used consistently over 3 to 12 months—alongside lifestyle changes and an anti-inflammatory diet—probiotics can:

• Lower systemic inflammation
• Enhance immune regulation
• Support long-term thyroid stability

The Integrative Medicine Approach to Thyroid and Gut Health

In integrative medicine, probiotics are not a magic bullet, but they are a powerful, supportive therapy for optimizing thyroid outcomes. By targeting the root causes of immune dysfunction and gut dysbiosis, practitioners can personalize care and improve long-term health outcomes (Rayman, 2019).

References

Huo, R., Du, T., Xu, Y., Xu, W., Chen, X., Sun, K., & Yu, X. (2021). Probiotic Bifidobacterium longum supplied with methimazole improved the thyroid function of Graves' disease patients through the gut-thyroid axis. Frontiers in Cellular and Infection Microbiology, 11, 739707. https://doi.org/10.3389/fcimb.2021.739707

Knezevic, J., Starchl, C., Tmava Berisha, A., & Amrein, K. (2020). Thyroid-gut-axis: How does the microbiota influence thyroid function? Nutrients, 12(6), 1769. https://doi.org/10.3390/nu12061769

Rayman, M. P. (2019). Multiple nutritional factors and thyroid disease, with particular reference to autoimmune thyroid disease. Proceedings of the Nutrition Society, 78(1), 34-44. https://doi.org/10.1017/S0029665118001192

Vahid, F., Haghighatdoost, F., Alizadeh, S., Jahanjou, F., Ravanbakhsh, Z., Mirghotbi, M., Salehi, M., & Shabbidar, S. (2023). The effect of synbiotic supplementation on hypothyroidism: A randomized double-blind placebo controlled clinical trial. PLOS ONE, 18(2), e0277213. https://doi.org/10.1371/journal.pone.0277213

Wang, Y., Fang, Y., Huang, W., Zhou, X., Wang, D., Ping, F., & Li, J. (2024). Effect of probiotics or prebiotics on thyroid function: A meta-analysis of eight randomized controlled trials. PLOS ONE, 19(1), e0296733. https://doi.org/10.1371/journal.pone.0296733

The Integrative Health Practitioner Certification Program 

December 1st 2025

The Integrative Health Practitioner 

Certification Program 

Starting December 1st 2025